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  5. Bradi4g02910

Bradi4g02910


Description : Protein of unknown function (DUF1162)


Gene families : OG_42_0003893 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g02910
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g40279 No alias protein kinase domain containing protein, expressed 0.03 Orthogroups_2024-Update
Pp1s62_220V6 No alias tpa: vacuolar protein sorting-associated protein vps13... 0.03 Orthogroups_2024-Update
Seita.3G373600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.008G150700.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
InterPro domains Description Start Stop
IPR031645 VPS13_C 2756 2884
IPR009543 SHR-BD 2208 2513
No external refs found!