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  5. Bradi4g02925

Bradi4g02925


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g02925
Cluster HCCA clusters: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Brara.C04314.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.06G084700 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
MA_137730g0010 No alias (at1g49450 : 217.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
Potri.003G202700 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.4G105600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G163600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g013880 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen01g051310 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update
Sopen02g034840 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update
Sopen03g032900 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 141 165
IPR001680 WD40_repeat 97 123
IPR001680 WD40_repeat 410 459
IPR001680 WD40_repeat 365 399
IPR001680 WD40_repeat 258 289
No external refs found!