Bradi4g04260

Description : OBF-binding protein 3

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi4g04260
Cluster	HCCA clusters: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
A4A49_13356	No alias	cyclic dof factor 3	0.02	Orthogroups_2024-Update
A4A49_30381	No alias	dof zinc finger protein pbf	0.02	Orthogroups_2024-Update
At1g51700	No alias	Dof zinc finger protein DOF1.7...	0.02	Orthogroups_2024-Update
At2g34140	No alias	Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967]	0.04	Orthogroups_2024-Update
At2g37590	No alias	Dof zinc finger protein DOF2.4...	0.02	Orthogroups_2024-Update
At4g00940	No alias	Dof zinc finger protein DOF4.1...	0.03	Orthogroups_2024-Update
Bradi1g15420	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Bradi1g26570	No alias	TARGET OF MONOPTEROS 6	0.04	Orthogroups_2024-Update
Brara.B00052.1	No alias	transcription factor *(DOF)	0.07	Orthogroups_2024-Update
Brara.B03961.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.C01888.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.E02083.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.I01305.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.I04266.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.J02876.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
GRMZM2G042218	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
GRMZM2G123900	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
GRMZM2G144172	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
GRMZM5G880268	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Glyma.01G049400	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
Glyma.02G062700	No alias	OBF binding protein 1	0.02	Orthogroups_2024-Update
Glyma.02G108600	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.06G194800	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.07G012100	No alias	DOF zinc finger protein 1	0.02	Orthogroups_2024-Update
Glyma.07G193900	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.08G195300	No alias	DOF zinc finger protein 1	0.02	Orthogroups_2024-Update
Glyma.08G358100	No alias	DNA binding with one finger 2.4	0.03	Orthogroups_2024-Update
Glyma.09G201000	No alias	Dof-type zinc finger DNA-binding family protein	0.09	Orthogroups_2024-Update
Glyma.13G177600	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Glyma.13G230200	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.13G335200	No alias	OBF-binding protein 3	0.05	Orthogroups_2024-Update
Glyma.15G044800	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.15G071400	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.15G215500	No alias	cycling DOF factor 1	0.03	Orthogroups_2024-Update
Glyma.16G022900	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.17G101000	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.19G118000	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
HORVU2Hr1G095390.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU3Hr1G116260.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU5Hr1G021290.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
LOC_Os04g58190	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g26620	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_16692g0010	No alias	(at5g60200 : 130.0) Encodes a Dof-type transcription...	0.02	Orthogroups_2024-Update
MA_18267g0010	No alias	(at5g62940 : 141.0) HCA2 induces the formation of...	0.02	Orthogroups_2024-Update
Mp2g20790.1	No alias	transcription factor (DOF)	0.01	Orthogroups_2024-Update
PSME_00053408-RA	No alias	(at5g39660 : 183.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
Potri.002G129600	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Potri.005G149100	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.006G084200	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Pp1s12_364V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Seita.9G259300.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Sobic.001G078700.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Sobic.001G489900.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.009G153400.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Solyc02g090310	No alias	Dof zinc finger protein (AHRD V3.3 - W9QGW0_9ROSA)	0.03	Orthogroups_2024-Update
Solyc03g112930	No alias	Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC)	0.02	Orthogroups_2024-Update
Solyc05g054510	No alias	Dof zinc finger protein (AHRD V3.3 *** A0A0K9PZW2_ZOSMR)	0.02	Orthogroups_2024-Update
Solyc06g005130	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RMR9_9ROSA)	0.02	Orthogroups_2024-Update
Solyc06g062520	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QMS6_9ROSA)	0.02	Orthogroups_2024-Update
Sopen02g022800	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen02g035000	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen09g005390	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	128	182

External Links

No external refs found!

Bradi4g04260

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation