1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi4g04640

Bradi4g04640


Description : Photosystem II reaction center PsbP family protein


Gene families : OG_42_0006238 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006238_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g04640
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cre08.g362900 No alias Photosystem II reaction center PsbP family protein 0.04 Orthogroups_2024-Update
GRMZM6G924006 No alias Photosystem II reaction center PsbP family protein 0.03 Orthogroups_2024-Update
Glyma.03G230300 No alias Photosystem II reaction center PsbP family protein 0.05 Orthogroups_2024-Update
HORVU5Hr1G022750.1 No alias protein involved in PS-I assembly *(PPD1) 0.03 Orthogroups_2024-Update
MA_81231g0010 No alias (at4g15510 : 288.0) Photosystem II reaction center PsbP... 0.06 Orthogroups_2024-Update
Potri.013G006500 No alias Photosystem II reaction center PsbP family protein 0.08 Orthogroups_2024-Update
Sobic.008G131700.2 No alias protein involved in PS-I assembly *(PPD1) 0.04 Orthogroups_2024-Update
Solyc01g106090 No alias PsbP-domain protein 1 (AHRD V3.3 *** A0A0F7GZA5_9ROSI) 0.06 Orthogroups_2024-Update
Sopen01g048480 No alias PsbP 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
CC GO:0009523 photosystem II IEA InterProScan predictions
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0019898 extrinsic component of membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002683 PsbP 87 263
No external refs found!