Bradi4g05095

Description : Function unknown

Gene families : OG_42_0000180 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi4g05095
Cluster	HCCA clusters: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g46250	No alias	Ribonuclease H-like superfamily protein	0.01	Orthogroups_2024-Update
LOC_Os03g41160	No alias	RNA-directed DNA polymerase, putative	0.01	Orthogroups_2024-Update
LOC_Os03g62000	No alias	retrotransposon protein, putative, unclassified, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g13430	No alias	expressed protein	0.02	Orthogroups_2024-Update
LOC_Os04g29469	No alias	retrotransposon protein, putative, unclassified, expressed	0.01	Orthogroups_2024-Update
LOC_Os05g14280	No alias	RNA-directed DNA polymerase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g35850	No alias	expressed protein	0.01	Orthogroups_2024-Update
LOC_Os07g22660	No alias	expressed protein	0.02	Orthogroups_2024-Update
LOC_Os10g37370	No alias	retrotransposon protein, putative, unclassified, expressed	0.01	Orthogroups_2024-Update
LOC_Os12g09520	No alias	conserved hypothetical protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	InterProScan predictions
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	Predicted GO
CC	GO:0031248	protein acetyltransferase complex	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044428	nuclear part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044451	nucleoplasm part	IEP	Predicted GO
CC	GO:0070461	SAGA-type complex	IEP	Predicted GO
CC	GO:1902493	acetyltransferase complex	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
CC	GO:1990234	transferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002156	RNaseH_domain	155	205

External Links

No external refs found!