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  5. Bradi4g06040

Bradi4g06040


Description : Histone superfamily protein


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g06040
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AC196961.2_FG003 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g22787 No alias Function unknown 0.01 Orthogroups_2024-Update
GRMZM2G421279 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G071190.2 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU6Hr1G011510.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU6Hr1G029210.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
MA_358570g0010 No alias (at5g59970 : 147.0) Histone superfamily protein;... 0.01 Orthogroups_2024-Update
MA_83574g0010 No alias (at5g59970 : 131.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0031082 BLOC complex IEP Predicted GO
CC GO:0031083 BLOC-1 complex IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044445 cytosolic part IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!