Sopen07g009740


Description : Retrotransposon gag protein


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g009740
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g61400 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g06110 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g16340 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.001G260400 No alias Function unknown 0.03 Orthogroups_2024-Update
Solyc01g020250 No alias No description available 0.04 Orthogroups_2024-Update
Solyc10g036800 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 11 107
No external refs found!