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  5. Bradi4g07267

Bradi4g07267


Description : Class II aminoacyl-tRNA and biotin synthetases superfamily protein


Gene families : OG_42_0003306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003306_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g07267
Cluster HCCA clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
At4g26870 No alias Aspartate--tRNA ligase 1, cytoplasmic... 0.02 Orthogroups_2024-Update
Pp1s235_87V6 No alias aspartyl-trna synthetase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 109 194
IPR004364 aa-tRNA-synt_II 232 551
No external refs found!