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  5. Bradi4g07790

Bradi4g07790


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0009808 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009808_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g07790
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Sobic.004G256900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g002840 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 394 417
IPR002885 Pentatricopeptide_repeat 975 1004
IPR002885 Pentatricopeptide_repeat 285 313
IPR002885 Pentatricopeptide_repeat 459 487
IPR002885 Pentatricopeptide_repeat 493 522
IPR002885 Pentatricopeptide_repeat 939 969
IPR002885 Pentatricopeptide_repeat 906 934
IPR002885 Pentatricopeptide_repeat 425 449
IPR002885 Pentatricopeptide_repeat 1006 1055
IPR002885 Pentatricopeptide_repeat 795 839
IPR002885 Pentatricopeptide_repeat 524 573
No external refs found!