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  5. Bradi4g08500

Bradi4g08500


Description : ribulose bisphosphate carboxylase small chain 1A


Gene families : OG_42_0000599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g08500
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Bradi5g04080 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 Orthogroups_2024-Update
Cre02.g120100 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 Orthogroups_2024-Update
HORVU2Hr1G010630.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
HORVU2Hr1G010670.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
HORVU2Hr1G010690.15 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
HORVU5Hr1G033540.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Orthogroups_2024-Update
HORVU5Hr1G038630.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
HORVU5Hr1G050990.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
HORVU5Hr1G051010.2 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 Orthogroups_2024-Update
Kfl00117_0060 kfl00117_0060_v1.1 (p08705|rbs_helan : 201.0) Ribulose bisphosphate... 0.02 Orthogroups_2024-Update
MA_47626g0010 No alias (p10053|rbs_pinth : 299.0) Ribulose bisphosphate... 0.04 Orthogroups_2024-Update
Mp4g15070.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
Mp4g15080.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
PSME_00038451-RA No alias (p10053|rbs_pinth : 290.0) Ribulose bisphosphate... 0.04 Orthogroups_2024-Update
Potri.004G100000 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 Orthogroups_2024-Update
Pp1s109_145V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.04 Orthogroups_2024-Update
Pp1s161_34V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.04 Orthogroups_2024-Update
Pp1s188_39V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.09 Orthogroups_2024-Update
Pp1s352_14V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.03 Orthogroups_2024-Update
Seita.3G312000.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Orthogroups_2024-Update
Seita.3G312200.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
Seita.3G312400.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Orthogroups_2024-Update
Sobic.005G042000.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR024680 RuBisCO_ssu_N 8 29
IPR000894 RuBisCO_sc_dom 59 166
No external refs found!