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  5. Sopen07g010120

Sopen07g010120


Description : Transposase-associated domain


Gene families : OG_42_0000101 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g010120
Cluster HCCA clusters: Cluster_396

Target Alias Description ECC score Gene Family Method Actions
Sopen01g021020 No alias Transposase family tnp2 0.04 Orthogroups_2024-Update
Sopen08g011050 No alias Transposase-associated domain 0.02 Orthogroups_2024-Update
Sopen11g015850 No alias Transposase family tnp2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 150 214
IPR029480 Transpos_assoc 1431 1504
No external refs found!