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  5. Bradi4g13202

Bradi4g13202


Description : polyubiquitin 10


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g13202
Cluster HCCA clusters: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467567 No alias polyubiquitin 10 0.01 Orthogroups_2024-Update
HORVU6Hr1G021700.4 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G029070.1 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
LOC_Os08g08790 No alias ubiquitin family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_93495g0010 No alias (at4g05320 : 654.0) One of five polyubiquitin genes in... 0.03 Orthogroups_2024-Update
Potri.017G135600 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Pp1s46_189V6 No alias polyubiquitin 0.02 Orthogroups_2024-Update
Seita.2G183800.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Seita.2G321300.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Solyc11g005650 No alias Ubiquitin family protein (AHRD V3.3 *-* AT4G02890.4) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 62
IPR000626 Ubiquitin_dom 68 139
IPR000626 Ubiquitin_dom 157 216
No external refs found!