1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi4g14010

Bradi4g14010


Description : Pentatricopeptide repeat (PPR-like) superfamily protein


Gene families : OG_42_0010070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010070_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g14010
Cluster HCCA clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
PSME_00046133-RA No alias (at4g19890 : 526.0) Pentatricopeptide repeat (PPR-like)... 0.05 Orthogroups_2024-Update
Sobic.005G182300.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc02g068890 No alias Pentatricopeptide repeat superfamily protein (AHRD V3.3... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 322 353
IPR002885 Pentatricopeptide_repeat 120 145
IPR002885 Pentatricopeptide_repeat 187 216
IPR002885 Pentatricopeptide_repeat 222 250
IPR002885 Pentatricopeptide_repeat 503 548
IPR002885 Pentatricopeptide_repeat 359 408
IPR002885 Pentatricopeptide_repeat 253 302
IPR002885 Pentatricopeptide_repeat 430 477
No external refs found!