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  5. Bradi4g17742

Bradi4g17742


Description : ribosomal protein L20


Gene families : OG_42_0003344 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003344_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g17742
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Bradi1g05746 No alias ribosomal protein L20 0.07 Orthogroups_2024-Update
Bradi1g05753 No alias ribosomal protein L20 0.11 Orthogroups_2024-Update
LOC_Os10g21314 No alias chloroplast 50S ribosomal protein L20, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
MF GO:0019843 rRNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005813 Ribosomal_L20 1 84
No external refs found!