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  5. Bradi4g18970

Bradi4g18970


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g18970
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
At5g44410 No alias Berberine bridge enzyme-like 27... 0.02 Orthogroups_2024-Update
Brara.A01152.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.04G113400 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.06G321500 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.06G321600 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.08G080600 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.08G080700 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G017270.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
LOC_Os06g35560 No alias reticuline oxidase-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00036068-RA No alias (at1g30760 : 377.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.011G158600 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G162900 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G163000 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.019G063400 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Seita.6G055100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Solyc02g022850 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20840.1) 0.02 Orthogroups_2024-Update
Sopen02g019250 No alias Berberine and berberine like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 445 505
IPR006094 Oxid_FAD_bind_N 97 194
No external refs found!