1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi4g19470

Bradi4g19470


Description : serine hydroxymethyltransferase 4


Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g19470
Cluster HCCA clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Bradi4g08097 No alias serine hydroxymethyltransferase 4 0.04 Orthogroups_2024-Update
GRMZM2G078143 No alias serine hydroxymethyltransferase 4 0.02 Orthogroups_2024-Update
Glyma.08G108900 No alias serine hydroxymethyltransferase 4 0.05 Orthogroups_2024-Update
LOC_Os01g65410 No alias serine hydroxymethyltransferase, mitochondrial... 0.04 Orthogroups_2024-Update
LOC_Os05g35440 No alias serine hydroxymethyltransferase, mitochondrial... 0.03 Orthogroups_2024-Update
Mp2g08370.1 No alias serine hydroxymethyltransferase 0.02 Orthogroups_2024-Update
Mp4g11800.1 No alias serine hydroxymethyltransferase. serine hydroxymethyltransferase 0.02 Orthogroups_2024-Update
Potri.006G232300 No alias serine hydroxymethyltransferase 3 0.02 Orthogroups_2024-Update
Potri.008G002900 No alias serine transhydroxymethyltransferase 1 0.02 Orthogroups_2024-Update
Pp1s291_35V6 No alias serine hydroxymethyltransferase 0.02 Orthogroups_2024-Update
Seita.5G398800.1 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.03 Orthogroups_2024-Update
Seita.8G115500.1 No alias serine hydroxymethyltransferase *(SHM) & EC_2.1... 0.03 Orthogroups_2024-Update
Solyc04g076790 No alias Serine hydroxymethyltransferase (AHRD V3.3 *** M1A7K0_SOLTU) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 57 456
No external refs found!