Bradi4g20547

Description : Mitochondrial transcription termination factor family protein

Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi4g20547
Cluster	HCCA clusters: Cluster_228

Target	Alias	Description	ECC score	Gene Family Method
444400	No alias	plastid transcriptionally active 15	0.03	Orthogroups_2024-Update
At5g64950	No alias	Emb [Source:UniProtKB/TrEMBL;Acc:Q9LV83]	0.03	Orthogroups_2024-Update
Bradi3g59167	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Bradi5g23380	No alias	Mitochondrial transcription termination factor family protein	0.05	Orthogroups_2024-Update
Glyma.08G107000	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Glyma.17G024500	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
LOC_Os04g54510	No alias	mTERF family protein, expressed	0.03	Orthogroups_2024-Update
MA_92135g0010	No alias	(at5g64950 : 117.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00000442-RA	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update
PSME_00009256-RA	No alias	(at1g62110 : 82.4) Mitochondrial transcription...	0.05	Orthogroups_2024-Update
PSME_00020295-RA	No alias	(at5g64950 : 119.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00032600-RA	No alias	(at5g64950 : 90.5) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00053051-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00057103-RA	No alias	(at3g46950 : 137.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
Potri.014G133200	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Seita.2G184700.1	No alias	mTERF-type transcription factor	0.05	Orthogroups_2024-Update
Seita.4G092000.1	No alias	mTERF-type transcription factor	0.05	Orthogroups_2024-Update
Seita.4G095000.1	No alias	mTERF-type transcription factor	0.05	Orthogroups_2024-Update
Seita.4G096800.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc04g072490	No alias	Epidermal patterning factor (AHRD V3.3 *** A0A072V8D7_MEDTR)	0.03	Orthogroups_2024-Update
evm.model.tig00020723.33	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004568	chitinase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
MF	GO:0008061	chitin binding	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003690	MTERF	71	328

External Links

No external refs found!

Bradi4g20547

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation