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  5. Bradi4g20900

Bradi4g20900


Description : RNA-binding protein


Gene families : OG_42_0001098 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g20900
Cluster HCCA clusters: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
Pp1s171_112V6 No alias lupus la 0.02 Orthogroups_2024-Update
Solyc12g019000 No alias La-related protein 7 (AHRD V3.3 *** W9RF44_9ROSA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
InterPro domains Description Start Stop
IPR006630 La_HTH 137 194
IPR009818 Ataxin-2_C 28 42
No external refs found!