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  5. Bradi4g22520

Bradi4g22520


Description : mitochondrial editing factor 22


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g22520
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
399 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
At1g17630 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Orthogroups_2024-Update
At2g34400 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.06 Orthogroups_2024-Update
At2g39620 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.03 Orthogroups_2024-Update
At3g01580 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Orthogroups_2024-Update
At3g16610 No alias Pentatricopeptide repeat-containing protein At3g16610... 0.02 Orthogroups_2024-Update
At3g25970 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Orthogroups_2024-Update
At3g61170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g49477 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g43210 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Brara.F03765.1 No alias RNA editing factor *(ELI1) 0.03 Orthogroups_2024-Update
GRMZM2G019689 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G060337 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G163359 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G163396 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G456114 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G180600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G078800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G068600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G034600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G213800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G001100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G062300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G272100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G026000 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Glyma.16G161800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G155800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G009930.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G015630.5 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G015970.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G018170.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU1Hr1G093220.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G084530.3 No alias RNA editing factor *(SLO4) 0.04 Orthogroups_2024-Update
HORVU3Hr1G073540.14 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G085770.2 No alias RNA editing factor *(CRR2) 0.02 Orthogroups_2024-Update
HORVU3Hr1G092840.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G040610.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G071640.4 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os01g60430 No alias pentatricopeptide repeat-containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g39410 No alias pentatricopeptide, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g39650 No alias pentatricopeptide, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os07g13540 No alias pentatricopeptide repeat domain containing protein,... 0.04 Orthogroups_2024-Update
LOC_Os07g39090 No alias pentatricopeptide repeat domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os07g39910 No alias pentatricopeptide repeat domain containing protein,... 0.04 Orthogroups_2024-Update
MA_10428121g0010 No alias (at4g37170 : 449.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
MA_141731g0010 No alias (at4g02750 : 772.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_16457g0010 No alias (at2g22070 : 558.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
MA_185098g0010 No alias (at3g49170 : 649.0) embryo defective 2261 (EMB2261);... 0.02 Orthogroups_2024-Update
MA_236484g0010 No alias (at4g02750 : 505.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_432641g0020 No alias (at1g20230 : 666.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_79624g0010 No alias (at3g25970 : 531.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_96662g0010 No alias (at3g03580 : 553.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00004102-RA No alias (at4g02750 : 508.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00010496-RA No alias (at2g22070 : 627.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
PSME_00013106-RA No alias (at4g13650 : 681.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
PSME_00032006-RA No alias (at2g13600 : 367.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00046266-RA No alias (at1g11290 : 679.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
Potri.017G084900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G006500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G244200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G216600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G326600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G130100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G277600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G163400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G057100.1 No alias RNA editing factor *(OTP85) 0.02 Orthogroups_2024-Update
Seita.9G403900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G436600.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G444200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G200500.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G333200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G153300.2 No alias RNA editing factor *(MEF21) 0.07 Orthogroups_2024-Update
Solyc02g070710 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc03g096610 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.05 Orthogroups_2024-Update
Solyc10g007940 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 142 167
IPR002885 Pentatricopeptide_repeat 347 370
IPR002885 Pentatricopeptide_repeat 170 194
IPR002885 Pentatricopeptide_repeat 211 234
IPR002885 Pentatricopeptide_repeat 271 319
No external refs found!