Bradi4g22770


Description : SEUSS transcriptional co-regulator


Gene families : OG_42_0001027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g22770
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
437711 No alias SEUSS transcriptional co-regulator 0.02 Orthogroups_2024-Update
A4A49_10884 No alias transcriptional corepressor seuss 0.02 Orthogroups_2024-Update
At1g43850 No alias Transcriptional corepressor SEUSS... 0.03 Orthogroups_2024-Update
GRMZM2G048680 No alias SEUSS transcriptional co-regulator 0.03 Orthogroups_2024-Update
Glyma.04G241900 No alias SEUSS transcriptional co-regulator 0.06 Orthogroups_2024-Update
Glyma.06G121500 No alias SEUSS transcriptional co-regulator 0.03 Orthogroups_2024-Update
Glyma.09G146200 No alias SEUSS-like 2 0.04 Orthogroups_2024-Update
Glyma.13G037600 No alias SEUSS transcriptional co-regulator 0.03 Orthogroups_2024-Update
Glyma.14G119800 No alias SEUSS transcriptional co-regulator 0.07 Orthogroups_2024-Update
Glyma.16G198200 No alias SEUSS-like 2 0.04 Orthogroups_2024-Update
Glyma.16G198300 No alias SEUSS-like 2 0.07 Orthogroups_2024-Update
MA_12796g0010 No alias (at1g43850 : 444.0) Encodes a transcriptional... 0.03 Orthogroups_2024-Update
MA_33392g0010 No alias (at5g62090 : 131.0) SEUSS-like 2 (SLK2); BEST... 0.04 Orthogroups_2024-Update
MA_9051g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Mp1g03270.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 Orthogroups_2024-Update
PSME_00036824-RA No alias (at5g62090 : 384.0) SEUSS-like 2 (SLK2); BEST... 0.04 Orthogroups_2024-Update
PSME_00037034-RA No alias (at1g43850 : 471.0) Encodes a transcriptional... 0.04 Orthogroups_2024-Update
Potri.002G072900 No alias SEUSS transcriptional co-regulator 0.06 Orthogroups_2024-Update
Seita.2G044700.1 No alias adapter component *(SEU/SLK) of transcriptional... 0.03 Orthogroups_2024-Update
Sobic.005G079800.1 No alias adapter component *(SEU/SLK) of transcriptional... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0043138 3'-5' DNA helicase activity IEP Predicted GO
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 363 616
No external refs found!