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  5. Bradi4g24740

Bradi4g24740


Description : tubby like protein 1


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g24740
Cluster HCCA clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Bradi2g56070 No alias tubby like protein 10 0.03 Orthogroups_2024-Update
Bradi3g13080 No alias tubby like protein 10 0.03 Orthogroups_2024-Update
Brara.G00196.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G001272 No alias tubby like protein 10 0.03 Orthogroups_2024-Update
Glyma.08G183100 No alias tubby like protein 10 0.02 Orthogroups_2024-Update
Glyma.14G073500 No alias tubby like protein 6 0.02 Orthogroups_2024-Update
Glyma.20G166900 No alias tubby like protein 1 0.03 Orthogroups_2024-Update
PSME_00011178-RA No alias (at2g47900 : 345.0) Member of TLP family; tubby like... 0.02 Orthogroups_2024-Update
Pp1s101_148V6 No alias f-box family protein 0.02 Orthogroups_2024-Update
Pp1s222_14V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.7G293600.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G368000.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc04g071440 No alias Tubby-like F-box protein (AHRD V3.3 *** K4BTD6_SOLLC) 0.02 Orthogroups_2024-Update
Sopen04g027400 No alias Tub family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 52 105
IPR000007 Tubby_C 116 440
No external refs found!