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  5. Bradi4g25900

Bradi4g25900


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g25900
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
156140 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
A4A49_15521 No alias root phototropism protein 3 0.04 Orthogroups_2024-Update
A4A49_30200 No alias btbpoz domain-containing protein 0.02 Orthogroups_2024-Update
A4A49_32094 No alias btbpoz domain-containing protein 0.03 Orthogroups_2024-Update
Bradi1g09246 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Bradi2g61714 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Bradi3g47620 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Bradi5g23307 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Brara.C01564.1 No alias phototropin signalling factor *(RPT2) 0.04 Orthogroups_2024-Update
Brara.E01281.1 No alias phototropin signalling factor *(RPT2) 0.04 Orthogroups_2024-Update
Brara.G01158.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Brara.I02813.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J02327.1 No alias substrate adaptor *(DOT3) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
Glyma.02G153500 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.08G281700 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.10G020800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.11G200201 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.13G320400 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.14G206100 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G023260.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G098170.4 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G053490.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G073650.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.05 Orthogroups_2024-Update
LOC_Os03g10880 No alias BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.03 Orthogroups_2024-Update
LOC_Os11g02610 No alias BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.05 Orthogroups_2024-Update
LOC_Os11g02620 No alias BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
MA_10430653g0010 No alias (at1g30440 : 376.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
PSME_00038127-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.007G053200 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Pp1s112_43V6 No alias protein binding 0.04 Orthogroups_2024-Update
Pp1s190_58V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s53_256V6 No alias root phototropism 0.02 Orthogroups_2024-Update
Pp1s67_83V6 No alias protein binding 0.02 Orthogroups_2024-Update
Seita.7G303000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G303100.1 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Seita.8G012100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G204300.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
Sobic.003G317000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G015200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G120000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G026800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G145300.3 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Solyc01g107180 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.05 Orthogroups_2024-Update
Solyc05g013570 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.07 Orthogroups_2024-Update
Solyc05g051580 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc07g043130 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen01g049440 No alias NPH3 family 0.03 Orthogroups_2024-Update
Sopen02g034770 No alias NPH3 family 0.02 Orthogroups_2024-Update
Sopen07g022670 No alias NPH3 family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 197 458
No external refs found!