Sopen07g012420

Description : Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit

Gene families : OG_42_0004228 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004228_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g012420
Cluster	HCCA clusters: Cluster_409

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g06936	No alias	photosystem II reaction center protein E	0.03	Orthogroups_2024-Update
Seita.J013200.1	No alias	component alpha *(PsbE) of PS-II cytochrome b559...	0.02	Orthogroups_2024-Update
Seita.J021600.1	No alias	component alpha *(PsbE) of PS-II cytochrome b559...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	InterProScan predictions
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013081	PSII_cyt_b559_N	6	34
IPR013082	PSII_cytb559_asu_lum	42	79

External Links

No external refs found!