Bradi4g27666

Description : Ribonuclease H-like superfamily protein

Gene families : OG_42_0000180 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi4g27666
Cluster	HCCA clusters: Cluster_276

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g26161	No alias	Ribonuclease H-like superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g30448	No alias	Ribonuclease H-like superfamily protein	0.03	Orthogroups_2024-Update
Bradi2g58691	No alias	Function unknown	0.04	Orthogroups_2024-Update
Bradi3g28170	No alias	Ribonuclease H-like superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g34611	No alias	Ribonuclease H-like superfamily protein	0.04	Orthogroups_2024-Update
Bradi3g36402	No alias	Ribonuclease H-like superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g45424	No alias	Function unknown	0.01	Orthogroups_2024-Update
Bradi3g57305	No alias	Polynucleotidyl transferase, ribonuclease H-like...	0.04	Orthogroups_2024-Update
Glyma.15G151650	No alias	RNA-directed DNA polymerase (reverse...	0.02	Orthogroups_2024-Update
LOC_Os06g50190	No alias	retrotransposon protein, putative, unclassified, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g14260	No alias	expressed protein	0.03	Orthogroups_2024-Update
LOC_Os10g34140	No alias	conserved hypothetical protein	0.02	Orthogroups_2024-Update
LOC_Os10g37940	No alias	retrotransposon protein, putative, unclassified, expressed	0.03	Orthogroups_2024-Update
Sobic.002G041333.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G059150.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	InterProScan predictions
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR026960	RVT-Znf	79	174
IPR002156	RNaseH_domain	298	417

External Links

No external refs found!