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  5. Bradi4g28137

Bradi4g28137


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g28137
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
122334 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
At4g35130 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.04 Orthogroups_2024-Update
At5g59200 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Orthogroups_2024-Update
Bradi3g59950 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.H02105.1 No alias RNA editing factor *(OTP90) 0.03 Orthogroups_2024-Update
GRMZM2G040947 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
GRMZM2G073017 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G098869 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G123014 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G158839 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G331779 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G430710 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G159100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G244300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G173900 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G141600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G062300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G179700 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G080630.6 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10429837g0010 No alias (at1g11290 : 623.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
MA_291996g0010 No alias (at1g11290 : 549.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
MA_50118g0010 No alias (at3g03580 : 671.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_63139g0020 No alias (at4g13650 : 686.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
MA_68933g0010 No alias (at5g04780 : 542.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_77437g0010 No alias (at1g11290 : 636.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00000625-RA No alias (at3g09040 : 618.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
PSME_00001942-RA No alias (at3g57430 : 689.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
PSME_00005432-RA No alias (at1g11290 : 677.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00008064-RA No alias (at3g49170 : 637.0) embryo defective 2261 (EMB2261);... 0.04 Orthogroups_2024-Update
PSME_00011508-RA No alias (at2g27610 : 744.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00015835-RA No alias (at4g01030 : 610.0) pentatricopeptide (PPR)... 0.05 Orthogroups_2024-Update
PSME_00016247-RA No alias (at3g12770 : 627.0) Encodes a pentatricopeptide repeat... 0.02 Orthogroups_2024-Update
PSME_00016653-RA No alias (at3g02010 : 685.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00022685-RA No alias (at3g46790 : 552.0) Encodes a member of a PCMP (plant... 0.02 Orthogroups_2024-Update
PSME_00024530-RA No alias (at4g18750 : 707.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00025245-RA No alias (at3g03580 : 656.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00032006-RA No alias (at2g13600 : 367.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00033965-RA No alias (at2g27610 : 573.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00035769-RA No alias (at4g13650 : 702.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00035796-RA No alias (at1g11290 : 732.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
PSME_00037812-RA No alias (at4g13650 : 600.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00041541-RA No alias (at3g12770 : 598.0) Encodes a pentatricopeptide repeat... 0.04 Orthogroups_2024-Update
PSME_00051765-RA No alias (at3g03580 : 693.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00055621-RA No alias (at1g16480 : 701.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00056168-RA No alias (at3g61170 : 686.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00056663-RA No alias (at3g13770 : 545.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00056843-RA No alias (at4g02750 : 457.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00056966-RA No alias (at4g13650 : 674.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
Potri.002G014800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.002G075200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G074500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G191000 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G019400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G065500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G076000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.1G191400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.1G205700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G290500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G001800.1 No alias RNA editing factor *(ELI1) 0.02 Orthogroups_2024-Update
Seita.2G177900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G302700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G373100.1 No alias RNA editing factor *(OTP90) 0.04 Orthogroups_2024-Update
Seita.3G244400.1 No alias RNA editing factor *(MEF32) 0.03 Orthogroups_2024-Update
Seita.4G046900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G225800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.5G055200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G176900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G302500.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Seita.5G326600.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.5G385400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G130100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G042500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G164600.1 No alias RNA editing factor *(MEF12) 0.03 Orthogroups_2024-Update
Seita.8G017200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G075300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G097200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G151300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G202100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G403900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G473200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G477500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G514800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.001G001200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G009400.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.001G069300.2 No alias RNA editing factor *(DEK36) 0.08 Orthogroups_2024-Update
Sobic.001G149100.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.001G151300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G212200.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.001G282300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G312700.1 No alias RNA editing factor *(MEF25) 0.07 Orthogroups_2024-Update
Sobic.001G347100.2 No alias Unknown function 0.09 Orthogroups_2024-Update
Sobic.001G436600.3 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.001G478900.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G034400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G084400.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.002G111700.6 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.002G172500.3 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.002G200500.3 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G240900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G292300.2 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.002G358900.3 No alias RNA editing factor *(OTP90) 0.03 Orthogroups_2024-Update
Sobic.002G385200.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.002G389200.2 No alias Unknown function 0.11 Orthogroups_2024-Update
Sobic.003G047400.1 No alias RNA editing factor *(OTP81) 0.07 Orthogroups_2024-Update
Sobic.003G109000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G119100.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.003G142400.2 No alias RNA editing factor *(PGN) 0.03 Orthogroups_2024-Update
Sobic.003G237100.2 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.003G239000.1 No alias RNA editing factor *(MEF1) 0.06 Orthogroups_2024-Update
Sobic.003G333200.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Sobic.003G337200.1 No alias RNA editing factor *(MEF10) 0.04 Orthogroups_2024-Update
Sobic.003G398900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G433600.1 No alias RNA editing factor *(OTP72) 0.05 Orthogroups_2024-Update
Sobic.004G025100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G051600.1 No alias Unknown function 0.1 Orthogroups_2024-Update
Sobic.004G053100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G141600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G217900.2 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.004G246800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G282000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G290400.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.004G312000.1 No alias RNA editing factor *(CLB19) 0.04 Orthogroups_2024-Update
Sobic.005G210700.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.006G069100.3 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.006G146400.4 No alias RNA editing factor *(MEF12) 0.1 Orthogroups_2024-Update
Sobic.007G006800.3 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.007G208400.1 No alias RNA editing factor *(REME1) 0.07 Orthogroups_2024-Update
Sobic.008G009000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.008G041000.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.008G066900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G116400.4 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.009G136200.1 No alias RNA editing factor *(MEF32) 0.05 Orthogroups_2024-Update
Sobic.009G155400.3 No alias Unknown function 0.11 Orthogroups_2024-Update
Sobic.009G238700.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.009G241200.3 No alias RNA editing factor *(ECB2/VAC1) 0.03 Orthogroups_2024-Update
Sobic.010G066900.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.010G067000.1 No alias RNA editing factor *(MEF29) 0.07 Orthogroups_2024-Update
Sobic.010G181000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.010G189200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G190900.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Solyc03g093630 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen02g025050 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen03g028590 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen05g018650 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen07g022420 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen10g004410 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen11g024970 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 251 280
IPR002885 Pentatricopeptide_repeat 158 181
IPR002885 Pentatricopeptide_repeat 282 311
IPR002885 Pentatricopeptide_repeat 220 243
IPR002885 Pentatricopeptide_repeat 314 341
IPR002885 Pentatricopeptide_repeat 96 123
IPR002885 Pentatricopeptide_repeat 517 541
IPR002885 Pentatricopeptide_repeat 40 62
IPR002885 Pentatricopeptide_repeat 65 90
IPR002885 Pentatricopeptide_repeat 417 442
IPR002885 Pentatricopeptide_repeat 127 150
IPR002885 Pentatricopeptide_repeat 344 373
IPR002885 Pentatricopeptide_repeat 189 218
IPR002885 Pentatricopeptide_repeat 443 489
IPR032867 DYW_dom 616 740
No external refs found!