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  5. Bradi4g28883

Bradi4g28883


Description : LOB domain-containing protein 22


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g28883
Cluster HCCA clusters: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
68988 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Brara.B01673.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os01g60960 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g06659 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_84752g0010 No alias (at2g40470 : 201.0) LOB domain-containing protein 15... 0.02 Orthogroups_2024-Update
Potri.001G281600 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Potri.010G177100 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Sobic.009G025900.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
CC GO:0030677 ribonuclease P complex IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
CC GO:1902555 endoribonuclease complex IEP Predicted GO
CC GO:1905348 endonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 68 163
No external refs found!