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  5. Bradi4g29380

Bradi4g29380


Description : homeobox 1


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g29380
Cluster HCCA clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
A4A49_36238 No alias homeobox-leucine zipper protein hat5 0.03 Orthogroups_2024-Update
A4A49_39997 No alias homeobox-leucine zipper protein athb-13 0.04 Orthogroups_2024-Update
At2g46680 No alias Homeobox-leucine zipper protein ATHB-7... 0.02 Orthogroups_2024-Update
Bradi1g71930 No alias homeobox 3 0.07 Orthogroups_2024-Update
Bradi1g73190 No alias Homeobox-leucine zipper protein family 0.04 Orthogroups_2024-Update
Bradi3g38600 No alias homeobox protein 5 0.04 Orthogroups_2024-Update
Brara.B00590.1 No alias HD-ZIP I/II-type transcription factor 0.04 Orthogroups_2024-Update
Brara.C00130.1 No alias regulatory protein *(LMI1) of floral meristem identity... 0.03 Orthogroups_2024-Update
Brara.C00651.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D02811.1 No alias HD-ZIP I/II-type transcription factor 0.04 Orthogroups_2024-Update
Brara.E03658.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G02910.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H01761.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I01088.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I04578.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G122076 No alias homeobox 1 0.03 Orthogroups_2024-Update
Glyma.04G231400 No alias homeobox 7 0.03 Orthogroups_2024-Update
Glyma.05G030000 No alias homeobox 1 0.02 Orthogroups_2024-Update
Glyma.11G242200 No alias homeobox protein 6 0.03 Orthogroups_2024-Update
HORVU4Hr1G078410.2 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G072810.6 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os07g39320 No alias homeobox domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_12053g0010 No alias (at1g69780 : 145.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
MA_130615g0020 No alias (at2g22430 : 152.0) Encodes a homeodomain leucine zipper... 0.04 Orthogroups_2024-Update
MA_169305g0010 No alias (at2g22430 : 149.0) Encodes a homeodomain leucine zipper... 0.02 Orthogroups_2024-Update
MA_19453g0040 No alias (at3g01470 : 183.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
PSME_00014389-RA No alias (at1g69780 : 146.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
Potri.010G093400 No alias Homeobox-leucine zipper protein family 0.04 Orthogroups_2024-Update
Potri.012G023700 No alias homeobox 7 0.02 Orthogroups_2024-Update
Pp1s154_145V6 No alias af402605_1homeodomain leucine zipper protein hdz2 0.02 Orthogroups_2024-Update
Pp1s77_184V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.1G253700.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Seita.2G284000.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Solyc03g113270 No alias LEVAHOX1G L.esculentum homeobox 0.03 Orthogroups_2024-Update
Solyc05g006980 No alias Homeobox leucine zipper family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g022490 No alias Homeobox domain 0.02 Orthogroups_2024-Update
Sopen03g022310 No alias Homeobox domain 0.03 Orthogroups_2024-Update
Sopen05g002940 No alias Homeobox domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 142 184
IPR001356 Homeobox_dom 85 140
No external refs found!