1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi4g30017

Bradi4g30017


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0004610 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004610_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g30017
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
At1g74400 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Orthogroups_2024-Update
Brara.G02277.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.06G196000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G066470.6 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00055556-RA No alias (at3g13770 : 367.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
Seita.2G202400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G198801.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g115790 No alias LOW QUALITY:Pentatricopeptide repeat-containing protein... 0.05 Orthogroups_2024-Update
Sopen03g034770 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 250 297
IPR002885 Pentatricopeptide_repeat 455 481
IPR002885 Pentatricopeptide_repeat 222 248
IPR002885 Pentatricopeptide_repeat 192 218
IPR002885 Pentatricopeptide_repeat 423 447
IPR002885 Pentatricopeptide_repeat 326 351
IPR002885 Pentatricopeptide_repeat 390 413
IPR002885 Pentatricopeptide_repeat 354 382
No external refs found!