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  5. Bradi4g30100

Bradi4g30100


Description : Calcium-binding EF-hand family protein


Gene families : OG_42_0003779 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003779_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g30100
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
A4A49_32283 No alias putative calcium-binding protein cml45 0.02 Orthogroups_2024-Update
At5g39670 No alias Probable calcium-binding protein CML46... 0.04 Orthogroups_2024-Update
Brara.D00981.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F03120.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Potri.004G122900 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Potri.017G084800 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Seita.8G176000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G199500.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Sobic.005G175800.1 No alias Unknown function 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 115 177
No external refs found!