1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi4g32380

Bradi4g32380


Description : RNA-binding protein 47C


Gene families : OG_42_0000344 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000344_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g32380
Cluster HCCA clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
At3g19130 No alias Polyadenylate-binding protein RBP47B... 0.03 Orthogroups_2024-Update
Bradi1g73030 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Orthogroups_2024-Update
Brara.J01649.1 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.03 Orthogroups_2024-Update
Glyma.07G259500 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G069180.3 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.07 Orthogroups_2024-Update
PSME_00009027-RA No alias (at4g27000 : 211.0) ATRBP45C; CONTAINS InterPro... 0.03 Orthogroups_2024-Update
PSME_00014443-RA No alias (at5g19350 : 396.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
PSME_00049035-RA No alias (at5g54900 : 346.0) RNA-binding protein 45A (RBP45A);... 0.04 Orthogroups_2024-Update
Seita.6G037200.1 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.02 Orthogroups_2024-Update
Solyc11g065880 No alias RNA-binding family protein (AHRD V3.3 *** A0A061FD24_THECC) 0.02 Orthogroups_2024-Update
Sopen11g025610 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008837 diaminopimelate epimerase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0047661 amino-acid racemase activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 301 365
IPR000504 RRM_dom 199 264
IPR000504 RRM_dom 106 172
No external refs found!