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  5. Bradi4g34667

Bradi4g34667


Description : Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g34667
Cluster HCCA clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
A4A49_27951 No alias squamosa promoter-binding-like protein 8 0.02 Orthogroups_2024-Update
At1g27360 No alias Squamosa promoter-binding-like protein 11... 0.03 Orthogroups_2024-Update
At1g69170 No alias Squamosa promoter-binding-like protein 6... 0.04 Orthogroups_2024-Update
Bradi5g24670 No alias squamosa promoter binding protein-like 8 0.02 Orthogroups_2024-Update
Brara.F00135.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I03020.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Cre09.g390023 No alias squamosa promoter binding protein-like 1 0.01 Orthogroups_2024-Update
Glyma.01G063700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.01G075900 No alias squamosa promoter binding protein-like 8 0.02 Orthogroups_2024-Update
Glyma.03G117500 No alias squamosa promoter binding protein-like 8 0.03 Orthogroups_2024-Update
Glyma.05G019000 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.05 Orthogroups_2024-Update
Glyma.17G080700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.05 Orthogroups_2024-Update
MA_3179g0020 No alias (at1g02065 : 176.0) Encodes an SBP-box gene, a member of... 0.03 Orthogroups_2024-Update
MA_47367g0010 No alias (at1g02065 : 173.0) Encodes an SBP-box gene, a member of... 0.02 Orthogroups_2024-Update
PSME_00047223-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00051919-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.015G098900 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Pp1s23_77V6 No alias squamosa promoter-binding 0.02 Orthogroups_2024-Update
Pp1s252_40V6 No alias squamosa promoter-binding 0.03 Orthogroups_2024-Update
Seita.2G324900.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Seita.5G432500.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G058900.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Solyc05g015840 No alias Squamosa promoter binding protein 13 0.03 Orthogroups_2024-Update
Solyc10g018780 No alias Squamosa promoter binding protein 8a 0.03 Orthogroups_2024-Update
Sopen03g033930 No alias SBP domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 106 179
No external refs found!