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  5. Bradi4g34680

Bradi4g34680


Description : K-box region and MADS-box transcription factor family protein


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g34680
Cluster HCCA clusters: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
A4A49_09228 No alias mads-box protein jointless 0.02 Orthogroups_2024-Update
A4A49_14828 No alias agamous-like mads-box protein agl104 0.03 Orthogroups_2024-Update
A4A49_15806 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.02 Orthogroups_2024-Update
A4A49_27621 No alias agamous-like mads-box protein agl9 0.04 Orthogroups_2024-Update
At1g01530 No alias AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] 0.04 Orthogroups_2024-Update
At1g77950 No alias AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6] 0.02 Orthogroups_2024-Update
At2g24840 No alias Agamous-like MADS-box protein AGL61... 0.03 Orthogroups_2024-Update
At5g51860 No alias MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] 0.02 Orthogroups_2024-Update
Bradi3g46920 No alias AGAMOUS-like 16 0.02 Orthogroups_2024-Update
Bradi5g21700 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.B01837.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.02 Orthogroups_2024-Update
Brara.B03396.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.C00582.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C04211.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.02 Orthogroups_2024-Update
Brara.E00310.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H01578.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G018589 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
GRMZM2G171365 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.01G064100 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.01 Orthogroups_2024-Update
Glyma.06G117600 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
Glyma.09G283800 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.10G240500 No alias AGAMOUS-like 42 0.02 Orthogroups_2024-Update
Glyma.11G252300 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.13G034100 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.13G255200 No alias AGAMOUS-like 21 0.02 Orthogroups_2024-Update
Glyma.18G004700 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.20G136600 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Glyma.20G136700 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
LOC_Os03g03070 No alias transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g38770 No alias OsMADS61 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g39130 No alias OsMADS56 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
PSME_00017701-RA No alias (at4g16370 : 263.0) Encodes an oligopeptide transporter... 0.03 Orthogroups_2024-Update
PSME_00043819-RA No alias (at4g16370 : 692.0) Encodes an oligopeptide transporter... 0.01 Orthogroups_2024-Update
Potri.001G284301 No alias AGAMOUS-like 21 0.02 Orthogroups_2024-Update
Pp1s209_130V6 No alias mads-box transcription factor 0.01 Orthogroups_2024-Update
Seita.1G308200.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G156800.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Seita.6G194800.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G223600.1 No alias MADS/AGL-type transcription factor 0.01 Orthogroups_2024-Update
Sobic.003G027000.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Sopen06g023350 No alias K-box region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR002487 TF_Kbox 87 174
IPR002100 TF_MADSbox 10 57
No external refs found!