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  5. Bradi4g35376

Bradi4g35376


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0004020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g35376
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
86162 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
At1g09190 No alias Pentatricopeptide repeat-containing protein At1g09190... 0.03 Orthogroups_2024-Update
At2g21090 No alias Pentatricopeptide repeat-containing protein At2g21090... 0.03 Orthogroups_2024-Update
Brara.D01246.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.E00798.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.07G252200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
PSME_00050135-RA No alias (at2g13600 : 432.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 184 231
IPR002885 Pentatricopeptide_repeat 316 364
IPR002885 Pentatricopeptide_repeat 417 465
IPR002885 Pentatricopeptide_repeat 58 80
IPR002885 Pentatricopeptide_repeat 287 310
IPR002885 Pentatricopeptide_repeat 259 284
IPR002885 Pentatricopeptide_repeat 156 180
No external refs found!