Bradi4g38060

Description : U2 snRNP auxilliary factor, large subunit, splicing factor

Gene families : OG_42_0001657 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001657_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi4g38060
Cluster	HCCA clusters: Cluster_209

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi4g09940	No alias	U2 snRNP auxilliary factor, large subunit, splicing factor	0.03	Orthogroups_2024-Update
GRMZM5G813627	No alias	U2 snRNP auxilliary factor, large subunit, splicing factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	321	390

External Links

No external refs found!