1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi4g38387

Bradi4g38387


Description : ENTH/VHS family protein


Gene families : OG_42_0001726 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001726_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g38387
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
At2g36480 No alias ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480] 0.05 Orthogroups_2024-Update
Glyma.03G191200 No alias ENTH/VHS family protein 0.02 Orthogroups_2024-Update
Glyma.10G251100 No alias PCF11P-similar protein 4 0.03 Orthogroups_2024-Update
Glyma.19G191800 No alias ENTH/VHS family protein 0.03 Orthogroups_2024-Update
Mp8g18940.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.05 Orthogroups_2024-Update
PSME_00017126-RA No alias (at2g36480 : 211.0) ENTH/VHS family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00040454-RA No alias (at4g04885 : 238.0) Encodes PCFS4 (Pcf11p-similar... 0.05 Orthogroups_2024-Update
Pp1s341_39V6 No alias zinc finger (c2h2-type) family protein 0.02 Orthogroups_2024-Update
Seita.6G039800.1 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm) complex 0.02 Orthogroups_2024-Update
evm.model.tig00000396.26 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006903 RNA_pol_II-bd 114 167
No external refs found!