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  5. Bradi4g38790

Bradi4g38790


Description : PLATZ transcription factor family protein


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g38790
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Brara.H00596.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.01G078600 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.19G188200 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
LOC_Os02g10000 No alias zinc-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g46610 No alias zinc-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp1g07250.1 No alias transcription factor (PLATZ) 0.02 Orthogroups_2024-Update
Potri.019G051200 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Seita.7G218800.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G288100.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Sopen08g025390 No alias PLATZ transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 62 139
No external refs found!