1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi4g38970

Bradi4g38970


Description : cellulose synthase-like A3


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g38970
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Brara.D02153.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
HORVU3Hr1G109930.12 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.03 Orthogroups_2024-Update
PSME_00046896-RA No alias (at4g07960 : 830.0) encodes a gene similar to cellulose... 0.03 Orthogroups_2024-Update
Seita.1G054000.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.04 Orthogroups_2024-Update
Sobic.001G075600.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 202 340
No external refs found!