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  5. Bradi4g40250

Bradi4g40250


Description : light-regulated zinc finger protein 1


Gene families : OG_42_0002427 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002427_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g40250
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Brara.G03597.1 No alias BBX class-IV transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g10580 No alias B-box zinc finger family protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G384000 No alias light-regulated zinc finger protein 1 0.01 Orthogroups_2024-Update
Potri.011G105400 No alias light-regulated zinc finger protein 1 0.01 Orthogroups_2024-Update
Seita.4G072000.1 No alias BBX class-IV transcription factor 0.01 Orthogroups_2024-Update
Sobic.003G026700.1 No alias BBX class-IV transcription factor 0.01 Orthogroups_2024-Update
Sobic.008G073400.1 No alias BBX class-IV transcription factor 0.01 Orthogroups_2024-Update
Sobic.010G041700.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 65 105
No external refs found!