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  5. Bradi4g41850

Bradi4g41850


Description : actin 7


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g41850
Cluster HCCA clusters: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
178381 No alias actin 7 0.02 Orthogroups_2024-Update
At3g18780 No alias Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q96292] 0.03 Orthogroups_2024-Update
Bradi2g24070 No alias actin 7 0.02 Orthogroups_2024-Update
Cre03.g176833 No alias actin 2 0.01 Orthogroups_2024-Update
GRMZM2G030169 No alias actin 7 0.02 Orthogroups_2024-Update
Glyma.02G172800 No alias actin 1 0.06 Orthogroups_2024-Update
Glyma.03G144800 No alias actin-11 0.04 Orthogroups_2024-Update
Glyma.04G215900 No alias actin 7 0.05 Orthogroups_2024-Update
Glyma.06G150100 No alias actin 7 0.03 Orthogroups_2024-Update
Glyma.08G146500 No alias actin 7 0.02 Orthogroups_2024-Update
Glyma.09G111200 No alias actin 1 0.07 Orthogroups_2024-Update
Glyma.11G139800 No alias actin-11 0.06 Orthogroups_2024-Update
Glyma.12G063400 No alias actin-11 0.06 Orthogroups_2024-Update
Glyma.19G147900 No alias actin 7 0.05 Orthogroups_2024-Update
HORVU1Hr1G047440.5 No alias actin filament protein 0.05 Orthogroups_2024-Update
HORVU5Hr1G039850.3 No alias actin filament protein 0.05 Orthogroups_2024-Update
Kfl00726_0080 kfl00726_0080_v1.... (at3g12110 : 635.0) Encodes an actin that is expressed... 0.01 Orthogroups_2024-Update
PSME_00011991-RA No alias (o81221|act_goshi : 743.0) Actin - Gossypium hirsutum... 0.02 Orthogroups_2024-Update
Potri.001G309500 No alias actin 7 0.04 Orthogroups_2024-Update
Seita.7G294000.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Sobic.001G112600.1 No alias actin filament protein 0.06 Orthogroups_2024-Update
Sobic.005G047100.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
Sobic.008G047000.1 No alias actin filament protein 0.04 Orthogroups_2024-Update
Solyc04g011500 No alias actin 0.06 Orthogroups_2024-Update
Solyc10g080500 No alias actin 0.03 Orthogroups_2024-Update
Sopen03g021220 No alias Actin 0.04 Orthogroups_2024-Update
evm.model.tig00020904.106 No alias (at3g18780 : 363.0) Encodes an actin that is... 0.02 Orthogroups_2024-Update
evm.model.tig00021350.36 No alias (o65316|act_mesvi : 705.0) Actin - Mesostigma viride &... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006544 glycine metabolic process IEP Predicted GO
BP GO:0006546 glycine catabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009071 serine family amino acid catabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0042133 neurotransmitter metabolic process IEP Predicted GO
BP GO:0042135 neurotransmitter catabolic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051254 positive regulation of RNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!