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  5. Bradi4g41960

Bradi4g41960


Description : FAR1-related sequence 5


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g41960
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
At1g52520 No alias Protein FAR1-RELATED SEQUENCE 6... 0.02 Orthogroups_2024-Update
At1g76320 No alias Protein FAR1-RELATED SEQUENCE 4... 0.04 Orthogroups_2024-Update
At3g22170 No alias FHY3 [Source:UniProtKB/TrEMBL;Acc:A0A178VJL5] 0.03 Orthogroups_2024-Update
At4g15090 No alias Protein FAR-RED IMPAIRED RESPONSE 1... 0.05 Orthogroups_2024-Update
Bradi1g48350 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
GRMZM2G034868 No alias FRS (FAR1 Related Sequences) transcription factor family 0.04 Orthogroups_2024-Update
Glyma.08G227500 No alias FAR1-related sequence 3 0.03 Orthogroups_2024-Update
Glyma.09G039300 No alias FAR1-related sequence 11 0.03 Orthogroups_2024-Update
HORVU2Hr1G040290.3 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Potri.003G031200 No alias FAR1-related sequence 8 0.02 Orthogroups_2024-Update
Potri.016G018100 No alias FAR1-related sequence 2 0.03 Orthogroups_2024-Update
Sobic.001G016600.3 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g096850 No alias Protein FAR1-RELATED SEQUENCE 3 (AHRD V3.3 *** A0A0B2S126_GLYSO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008193 tRNA guanylyltransferase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 578 606
IPR018289 MULE_transposase_dom 293 387
IPR004330 FAR1_DNA_bnd_dom 95 181
No external refs found!