1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi4g41990

Bradi4g41990


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG_42_0000387 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g41990
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
At3g52470 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Orthogroups_2024-Update
Bradi5g09670 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Orthogroups_2024-Update
Brara.E02913.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g33550 No alias harpin-induced protein 1 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g58860 No alias harpin-induced protein 1 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_86810g0010 No alias (at2g35980 : 111.0) Encodes a protein whose sequence is... 0.03 Orthogroups_2024-Update
Potri.012G006000 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Pp1s427_21V6 No alias hypothetical protein similar to Oryza sativa chromosome... 0.02 Orthogroups_2024-Update
Seita.3G269000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G296000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 82 185
No external refs found!