Bradi4g44040

Description : Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein

Gene families : OG_42_0001611 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001611_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi4g44040
Cluster	HCCA clusters: Cluster_215

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc05g050460	No alias	No description available	0.03	Orthogroups_2024-Update
Sopen10g018000	No alias	RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	186	206
IPR000504	RRM_dom	318	362

External Links

No external refs found!