Description : Dof zinc finger protein (AHRD V3.3 *** W9RD26_9ROSA)
Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc02g078620 | |
Cluster | HCCA clusters: Cluster_158 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
29563 | No alias | OBF binding protein 4 | 0.02 | Orthogroups_2024-Update | |
A4A49_13356 | No alias | cyclic dof factor 3 | 0.04 | Orthogroups_2024-Update | |
A4A49_33558 | No alias | dof zinc finger protein dof1.4 | 0.04 | Orthogroups_2024-Update | |
A4A49_34579 | No alias | dof zinc finger protein pbf | 0.03 | Orthogroups_2024-Update | |
At1g07640 | No alias | Dof-type zinc finger DNA-binding family protein... | 0.03 | Orthogroups_2024-Update | |
At1g29160 | No alias | Uncharacterized protein At1g29160 (Fragment)... | 0.02 | Orthogroups_2024-Update | |
GRMZM2G089949 | No alias | cycling DOF factor 2 | 0.02 | Orthogroups_2024-Update | |
GRMZM2G144172 | No alias | OBF-binding protein 3 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G162749 | No alias | cycling DOF factor 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.06G194800 | No alias | cycling DOF factor 3 | 0.03 | Orthogroups_2024-Update | |
Glyma.13G062500 | No alias | cycling DOF factor 2 | 0.03 | Orthogroups_2024-Update | |
Glyma.18G260500 | No alias | cycling DOF factor 2 | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g15900 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g48290 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g55340 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g07360 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
LOC_Os06g17410 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os07g48570 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
LOC_Os10g26620 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Mp2g20790.1 | No alias | transcription factor (DOF) | 0.02 | Orthogroups_2024-Update | |
PSME_00053408-RA | No alias | (at5g39660 : 183.0) Dof-type zinc finger... | 0.02 | Orthogroups_2024-Update | |
Potri.008G087800 | No alias | cycling DOF factor 2 | 0.03 | Orthogroups_2024-Update | |
Potri.014G036600 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s37_7V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
Seita.1G303300.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Seita.5G052700.1 | No alias | transcription factor *(DOF) | 0.02 | Orthogroups_2024-Update | |
Seita.9G525000.1 | No alias | transcription factor *(DOF) | 0.04 | Orthogroups_2024-Update | |
Sobic.001G034300.3 | No alias | transcription factor *(DOF) | 0.04 | Orthogroups_2024-Update | |
Sobic.009G014400.1 | No alias | transcription factor *(DOF) | 0.04 | Orthogroups_2024-Update | |
Sopen02g022790 | No alias | Dof domain, zinc finger | 0.04 | Orthogroups_2024-Update | |
Sopen03g034940 | No alias | Dof domain, zinc finger | 0.05 | Orthogroups_2024-Update | |
Sopen06g027050 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004126 | cytidine deaminase activity | IEP | Predicted GO |
MF | GO:0004474 | malate synthase activity | IEP | Predicted GO |
MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Predicted GO |
MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006097 | glyoxylate cycle | IEP | Predicted GO |
BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0006216 | cytidine catabolic process | IEP | Predicted GO |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0009164 | nucleoside catabolic process | IEP | Predicted GO |
BP | GO:0009972 | cytidine deamination | IEP | Predicted GO |
MF | GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity | IEP | Predicted GO |
MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
MF | GO:0019239 | deaminase activity | IEP | Predicted GO |
BP | GO:0019439 | aromatic compound catabolic process | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0030258 | lipid modification | IEP | Predicted GO |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Predicted GO |
BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | Predicted GO |
BP | GO:0042454 | ribonucleoside catabolic process | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044248 | cellular catabolic process | IEP | Predicted GO |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
BP | GO:0044282 | small molecule catabolic process | IEP | Predicted GO |
BP | GO:0046087 | cytidine metabolic process | IEP | Predicted GO |
BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | Predicted GO |
BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | Predicted GO |
BP | GO:0046487 | glyoxylate metabolic process | IEP | Predicted GO |
BP | GO:0046700 | heterocycle catabolic process | IEP | Predicted GO |
BP | GO:0046834 | lipid phosphorylation | IEP | Predicted GO |
BP | GO:0046854 | phosphatidylinositol phosphorylation | IEP | Predicted GO |
MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Predicted GO |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | Predicted GO |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Predicted GO |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Predicted GO |
BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
BP | GO:1901658 | glycosyl compound catabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 42 | 95 |
No external refs found! |