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  5. Bradi5g05162

Bradi5g05162


Description : Function unknown


Gene families : OG_42_0003590 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003590_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g05162
Cluster HCCA clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
405955 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU2Hr1G065910.1 No alias membrane trafficking factor *(GFS9) 0.02 Orthogroups_2024-Update
Seita.7G044700.1 No alias membrane trafficking factor *(GFS9) 0.04 Orthogroups_2024-Update
Sobic.006G035300.1 No alias membrane trafficking factor *(GFS9) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR019155 CLEC16A/TT9_N 98 248
No external refs found!