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  5. Bradi5g05663

Bradi5g05663


Description : ribulose-bisphosphate carboxylases


Gene families : OG_42_0000977 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000977_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g05663
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
137874 No alias ribulose-bisphosphate carboxylases 0.03 Orthogroups_2024-Update
Bradi1g39206 No alias ribulose-bisphosphate carboxylases 0.04 Orthogroups_2024-Update
PSME_00003758-RA No alias (p48704|rbl_ginbi : 185.0) Ribulose bisphosphate... 0.02 Orthogroups_2024-Update
Potri.T005800 No alias ribulose-bisphosphate carboxylases 0.02 Orthogroups_2024-Update
Seita.J020800.1 No alias large subunit of ribulose-1,5-bisphosphat... 0.02 Orthogroups_2024-Update
Sobic.003G172800.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.005G194400.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015977 carbon fixation IEA InterProScan predictions
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR017443 RuBisCO_lsu_fd_N 24 121
No external refs found!