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  5. Bradi5g07090

Bradi5g07090


Description : Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain


Gene families : OG_42_0000547 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g07090
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Brara.G02857.1 No alias mRNA endoribonuclease *(G3BP) 0.03 Orthogroups_2024-Update
GRMZM2G139407 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.02 Orthogroups_2024-Update
Glyma.18G267400 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.03 Orthogroups_2024-Update
LOC_Os04g30430 No alias nuclear transport factor 2, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00006402-RA No alias (at5g43960 : 231.0) Nuclear transport factor 2 (NTF2)... 0.03 Orthogroups_2024-Update
Seita.1G165100.1 No alias mRNA endoribonuclease *(G3BP) 0.04 Orthogroups_2024-Update
Seita.9G362600.1 No alias mRNA endoribonuclease *(G3BP) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002075 NTF2 27 142
IPR000504 RRM_dom 330 388
No external refs found!