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  5. Bradi5g08920

Bradi5g08920


Description : Clp ATPase


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g08920
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467644 No alias heat shock protein 101 0.01 Orthogroups_2024-Update
Cre43.g760497 No alias CLPC homologue 1 0.03 Orthogroups_2024-Update
Glyma.04G200400 No alias CLPC homologue 1 0.02 Orthogroups_2024-Update
Glyma.06G165200 No alias CLPC homologue 1 0.02 Orthogroups_2024-Update
PSME_00036597-RA No alias (at5g50920 : 1365.0) Encodes a protein that is similar... 0.03 Orthogroups_2024-Update
Potri.017G090600 No alias casein lytic proteinase B3 0.03 Orthogroups_2024-Update
Sobic.006G065100.1 No alias chaperone component *(ClpD) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
Solyc12g042060 No alias ATP-dependent Clp protease ATP-binding subunit ClpA... 0.03 Orthogroups_2024-Update
evm.model.tig00000655.28 No alias (at5g50920 : 1134.0) Encodes a protein that is similar... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 306 422
IPR003959 ATPase_AAA_core 654 829
IPR004176 Clp_N 91 133
IPR004176 Clp_N 168 215
IPR019489 Clp_ATPase_C 835 914
No external refs found!