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  5. Bradi5g09830

Bradi5g09830


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g09830
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
A4A49_18116 No alias ring-h2 finger protein atl78 0.02 Orthogroups_2024-Update
At3g14320 No alias Putative RING-H2 finger protein ATL61... 0.03 Orthogroups_2024-Update
At4g09100 No alias RING-H2 finger protein ATL39... 0.03 Orthogroups_2024-Update
At4g15975 No alias RING/U-box superfamily protein [Source:TAIR;Acc:AT4G15975] 0.03 Orthogroups_2024-Update
Brara.B02534.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C03092.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E02317.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.03 Orthogroups_2024-Update
Brara.G00267.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G01087.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G004480 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G029623 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G031280 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G460958 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G210400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G099800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G068200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G016510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU3Hr1G069960.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G072730.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G042940.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G120930.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os04g34230 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10436028g0020 No alias (at5g01880 : 117.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_17390g0010 No alias (at3g61550 : 149.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_226198g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_80729g0030 No alias (at3g16720 : 139.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.04 Orthogroups_2024-Update
PSME_00003022-RA No alias (at1g72200 : 164.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.001G032300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G159300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G119900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G073500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G043900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Pp1s257_3V6 No alias ac009177_16 ring-h2 zinc finger protein atl6 0.02 Orthogroups_2024-Update
Seita.1G270700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.7G218600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G057000.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G279000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.006G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc04g014220 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.03 Orthogroups_2024-Update
Sopen02g016820 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen04g004890 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 115 157
No external refs found!