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  5. Bradi5g10961

Bradi5g10961


Description : ribosomal protein L2


Gene families : OG_42_0001344 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001344_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g10961
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
GRMZM5G854146 No alias ribosomal protein L2 0.03 Orthogroups_2024-Update
Kfl00873_0040 kfl00873_0040_v1.1 (q9mut9|rk2_mesvi : 260.0) Chloroplast 50S ribosomal... 0.02 Orthogroups_2024-Update
Seita.J008400.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0031647 regulation of protein stability IEP Predicted GO
MF GO:0042301 phosphate ion binding IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0050821 protein stabilization IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 24 112
No external refs found!