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  5. Bradi5g11990

Bradi5g11990


Description : cryptochrome 1


Gene families : OG_42_0001675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g11990
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G024739 No alias cryptochrome 1 0.02 Orthogroups_2024-Update
LOC_Os04g37920 No alias FAD binding domain of DNA photolyase domain containing... 0.02 Orthogroups_2024-Update
Mp2g17590.1 No alias cryptochrome photoreceptor (CRY) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 295 493
IPR006050 DNA_photolyase_N 17 177
IPR020978 Cryptochrome_C 522 642
No external refs found!